CDS

Accession Number TCMCG016C11758
gbkey CDS
Protein Id OMO81163.1
Location complement(join(23316..23474,23557..23611,23851..23915,24045..24185,24341..24394,24723..24972,25107..25213,25402..25499,25589..26135,26217..26325,26499..26785))
Organism Corchorus capsularis
locus_tag CCACVL1_12562

Protein

Length 623aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01010210.1
Definition Zinc finger, UBP-type [Corchorus capsularis]
Locus_tag CCACVL1_12562

EGGNOG-MAPPER Annotation

COG_category O
Description Brca1-associated
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K10632        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko04014        [VIEW IN KEGG]
map04014        [VIEW IN KEGG]
GOs GO:0000151        [VIEW IN EMBL-EBI]
GO:0000165        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005048        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007264        [VIEW IN EMBL-EBI]
GO:0007265        [VIEW IN EMBL-EBI]
GO:0008139        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009968        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010648        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0023014        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0023057        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031965        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033218        [VIEW IN EMBL-EBI]
GO:0035556        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042277        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTCATCCTCCGAGTCCACTCAGTGGACACCGAGCAACCCATCGGCAGCTCCGAAGAAATCGAGTTCTACGCGACAACTTCTCCATCGAAGCCTAACCCTCAAATCAGTGAAAGGAGAGGCGTGATTCACCTCTATCGGAAGGCCTCCAAAAGCTCCCTCCCAAACCCTAGCACTCGCTCCACTACCCTCTTCGTCGTTGCCGTCCCCAACTATCTCTCCGCCGTCGATTTCATCCGATTCGCTGGCCCCCATCTCGATAACATCGTCCATCTCCTCTTCATCAGGAATGATGGAATTGAGGATAGGTATAGCGTAATAATAAATCTAGTTGATCAGTCGGCTGCAGATGGATTTTATAGGAGCTTGAATGGGAAGAGGTTTTCACCTGCTGAGGCTGAGTTTTGTCATATTCTTTTTACTCATTCTGTGGAATACACTGAATCGTGTGAGATTGCAAGCACACCTCCAGTGGAATACATGGAATCTGAATCGTGTGAGATTGCAAGCACACCTCCAGTGGAATTCACGGAATCGGGTGAGATTGCAAGCACACCTCCAGTGGAATACACGGAATCTGGTGAGACTGCAAGCACACCTCCAGTGGAATTCACGGATGCAAGCACGCCTCCAGTGGAATTCACGGAATCGGGTGAGACTGAGACTGCAAGCACACCTCCAGTGGAATACACGGAATCGGGTGAGATTGCAAGCACACCTCCTGTGGAATTCACGGAATCGGGTGAGACTGAGACTGCAAGCACACCTCCAGTGGAATACACGGAATCGGGTGAGATTGCAAGCACACCTCCAGTGGAATTCACGGAATCGGGTGAGACTGCAAGCACACCTAAAGTGAAATTCACGGAATCGGGCGAGACTGCAAGCAAACCTAAACCTAAAGTAAAATTCATGGAGTTGCCTACATGCCCCATTTGTCTTGAGAGATTGGACCCTGATACTAGCGGAATACTTCATACGTTTTGCGACCATTCCTTTCAATGTTCTTGCACTTCGAAATGGACTTACTTGTCATGCACAGTCTGCCGATTTTGCCAGCAGCAGGATGAGAAACCGTCCTGTTCTGTTTGTGGATCACTCGAGAATCTTTGGATCTGCTTGATATGTGGTTTTATGGGGTGTGGAAGATATAAAGAAGGTCATGCTGTTAGACATTGGAAAGATACTCAACATTGCTATTCCCTTGAGTTAATATCACAGCAAATATGGGATTATGTGGGTGATAAATATGCTCAACGTTTAAATCCGTCAAAAGTTGATGGCAAGTCAGTTGAGATGAGCTTGCACTGTACGTCACTTGAAGGAAATTGTGGTTCCTGTGGTAATGGTGATGATTCTGGAATTAGAGAGGCTATACGTCACAGCAAAGTTGAAGCGACTTTTGATGAGTACAGCCGTCTTCTAGCTACTGAATGGGAGAAGCAAAGACAAAATTATGAATCTCTACTTGCAGAAGCCAAAAGCAAAAGAGAGAGTTTAATTGCTGACGCGGTAAAGACTGCGACTTCTGGGATGCAGGACATCCAAAGTGAACTTGAGCAGTGCACAGAGGAGAAAAATGCTCTTGCTGAGATTAATCGCGATCTCATTAAAAACCAAAAAATTTGGAGCAATAAGGTCAAGGAAATTGAAGAGAGGGAAGCTGCTCAATTGAAGTTGAAGGATGAGATTATACTTGATCTTGAAGAACAGATACGAGATATTAAAGTCTATATTGAAGCTCAGAAGACACTTAAGGACATGACTGATTCAGATGGCATCAAGGGAGGTACACTCTTACCTGTACCTCCAACGCAATCTTCCTCGGCTAACACCAAGAAGCACAAGAAGTCTGGTCGAAGGAGGAATTAG
Protein:  
MFILRVHSVDTEQPIGSSEEIEFYATTSPSKPNPQISERRGVIHLYRKASKSSLPNPSTRSTTLFVVAVPNYLSAVDFIRFAGPHLDNIVHLLFIRNDGIEDRYSVIINLVDQSAADGFYRSLNGKRFSPAEAEFCHILFTHSVEYTESCEIASTPPVEYMESESCEIASTPPVEFTESGEIASTPPVEYTESGETASTPPVEFTDASTPPVEFTESGETETASTPPVEYTESGEIASTPPVEFTESGETETASTPPVEYTESGEIASTPPVEFTESGETASTPKVKFTESGETASKPKPKVKFMELPTCPICLERLDPDTSGILHTFCDHSFQCSCTSKWTYLSCTVCRFCQQQDEKPSCSVCGSLENLWICLICGFMGCGRYKEGHAVRHWKDTQHCYSLELISQQIWDYVGDKYAQRLNPSKVDGKSVEMSLHCTSLEGNCGSCGNGDDSGIREAIRHSKVEATFDEYSRLLATEWEKQRQNYESLLAEAKSKRESLIADAVKTATSGMQDIQSELEQCTEEKNALAEINRDLIKNQKIWSNKVKEIEEREAAQLKLKDEIILDLEEQIRDIKVYIEAQKTLKDMTDSDGIKGGTLLPVPPTQSSSANTKKHKKSGRRRN